Checklist of marine pelagic diatoms from the Turkish side of the Aegean Sea

Edanur Erbaş; Fatma Çolak Sabancı

doi:10.12714/egejfas.42.3.02

TR EN

Ege Denizi’nin Türkiye kıyılarındaki pelajik denizel diyatomların kontrol listesi

Öz

Bu çalışma, Ege Denizi’nin Türkiye kıyılarında kaydedilen denizel diyatom türlerine ilişkin bir kontrol listesi oluşturmak amacıyla 41 literatür çalışmasının değerlendirilmesiyle hazırlanmıştır. Bölgedeki pelajik sularda toplamda 75 cinse ait 194 diyatom türü tespit edilmiş olup, bunlardan 32’si zararlı tür kategorisine girmektedir. Bu türler arasında bazıları aşırı üreme göstermiştir. Bu çalışma, özellikle moleküler tekniklerin sınırlı kullanımı ve bazı türlerin domoik asit üretme potansiyeline sahip olmasına rağmen, bu bölgede toksisite değerlendirmelerinin eksikliği gibi önemli araştırma boşluklarını ortaya çıkarmaktadır. Gelecekteki araştırmalar, tür tespitinin doğruluğunu artırmak, zararlı alg üreme (HAB) risklerini değerlendirmek ve uzun vadeli izleme stratejilerini güçlendirmek için moleküler yöntemlerin ve domoik asit analizlerinin entegrasyonuna öncelik vermelidir. Ayrıca, tür kontrol listelerinin düzenli olarak güncellenmesi, kapsamlı veri setlerinin oluşturulması, biyolojik çeşitlilik değerlendirmelerinin geliştirilmesi ve Ege Denizi’nin Türkiye kıyılarındaki fitoplankton araştırmalarının ilerletilmesi açısından kritik öneme sahiptir.

Anahtar Kelimeler

Checklist of marine pelagic diatoms from the Turkish side of the Aegean Sea

Abstract

This study presents a comprehensive checklist of marine diatoms recorded along the Turkish coast of the Aegean Sea, based on the evaluation of 41 literature studies. A total of 194 diatom species, belonging to 75 genera, were identified in the pelagic waters of the region, with 32 species recognized as harmful. Among them, several species exhibited bloom events or reached high cell concentrations. The study also highlights significant research gaps, particularly the limited application of molecular techniques and some species are known to have domoic acid-producing potential, but their toxicity remains unexamined in this region due to the lack of dedicated studies. Future research should prioritize integrating molecular methods and domoic acid analyses to improve species identification, assess harmful algal bloom (HAB) risks, and strengthen long-term monitoring strategies. Furthermore, regularly updating species checklists is essential for developing comprehensive datasets, enhancing biodiversity assessments, and advancing phytoplankton research along the Turkish coast of the Aegean Sea.

Keywords

Etik Beyan

No specific ethical approval was necessary for the study

Kaynakça

Ağlaç E., & Balkıs, N. (2014). Investigation of the seasonal variation in the phytoplankton in the surface waters of the Gulf of Edremit. IUFS Journal of Biology, 73(2), 31–46.
Akçaalan, R., Özbayram, G., Kaleli, A., Oğuz, A., Koker, L., & Albay, M. (2023). Does environmental DNA reflect the actual phytoplankton diversity in the aquatic environment? Case study of marine mucilage in the Sea of Marmara. Environmental Science and Pollution Research, 30, 1–11. https://doi.org/10.1007/s11356-023-27528-7
Aktan Turan, Y., Çardak, M., Ciftçi, P.S. (2007). Kafes balıkçılığının fitoplankton üzerine etkileri: Muğla bölgesinde yapılan ön çalışma. İstanbul Üniversitesi Su Ürünleri Dergisi, 24(1), 1–11.
Alcoverro, T., Conte, E., & Mazzella, L. (2000). Production of mucilage by the Adriatic epipelic diatom Cylindrotheca closterium (Bacillariophyceae) under nutrient limitation. Journal of Phycology, 36(6), 1087–1095.
Altuğ, G., Aktan, Y., Oral, M., Topaloglu, B., Dede, A., Keskin, C., İşinibilir, M., Çardak, M., & Çiftçi, P. S. (2011). Biodiversity of the northern Aegean Sea and southern part of the Sea of Marmara, Turkey. Marine Biodiversity Records, 4(e65), 1–17. https://doi.org/doi:10.1017/S1755267211000662
Andrea, B., Odd, L., & Bodil, H. (1999). North Atlantic oscillation primary productivity and toxic phytoplankton in the Gullmar Fjord, Sweden (1985–1996). Proceedings of the Royal Society B Biological Sciences, 425–430. https://doi.org/10.1098/rspb.1999.0655
Assmy, P., & Smetacek, V. (2009). Algal Blooms. In M. Schaechter (Ed.), Encyclopedia of Microbiology (Third Edition) (pp. 27–41). Academic Press. https://doi.org/10.1016/B978-012373944-5.00001-8
Bailet, B., Apothéloz-Perret-Gentil, L., Baričević, A., Chonova, T., Franc, A., Frigerio, J.-M., Kelly, M., Mora, D., Pfannkuchen, M., Proft, S., Ramon, M., Vasselon, V., Zimmermann, J., & Kahlert, M. (2020). Diatom DNA metabarcoding for ecological assessment: Comparison among bioinformatics pipelines used in six European countries reveals the need for standardization. Science of the Total Environment, 745, 140948. https://doi.org/10.1016/j.scitotenv.2020.140948

Balkıs, N. (2005). Contributions to the knowledge of marine phytoplankton of Turkey. Pakistan Journal of Botany, 37(4), 807–814.
Balkıs, N. (2008). First record of Planktoniella sol (Wallich) Schütt, 1893 from Turkish coasts. European Journal of Biology, 67(1), 89–92.
Balkıs, N. (2009). Seasonal variations of microphytoplankton assemblages and environmental variables in the coastal zone of Bozcaada Island in the Aegean Sea (NE Mediterranean Sea). Aquatic Ecology, 43, 249–270. https://doi.org/10.1007/s10452-008-9175-x
Bates, S., & Trainer, V. (2006). The Ecology of Harmful Diatoms. In E. Granéli, J.T. Turner, (Eds.), Ecology of Harmful Algae, (pp. 81–93). Springer.
Bizsel, N., Benli, H.A., Bizsel, K.C., & Metin, G. (2001). A synoptic study on the phosphate and phytoplankton relationship in the hypereutrophicated Izmir Bay (Aegean Sea). Turkish Journal of Engineering & Environmental Science, 25, 89–99.
Bizsel, N., Ozturk, M., & Metin, G. (1997). The role of iron on the phytoplankton growth in heavily polluted Izmir Bay, Aegean Sea. WIT Transactions on Ecology and the Environment, 14, 659–669. Cleve, P. T. (1894–1895). Synopsis of the naviculoid diatoms. Kongliga Svenska Vetenskaps Akademiens Handlingar, 27(3), 1-219.
Cupp, E. E. (1943). Marine plankton diatoms of the West Coast of North America. University of California Press, Berkeley, 1–237.
Çolak Sabanci, F., & Koray, T. (2001). The impact of pollution on the vertical and horizontal distribution of microplankton in İzmir Bay (Aegean Sea). Ege Journal of Fisheries and Aquatic Sciences, 18(1-2), 187–202.
Çolak Sabancı, F., & Koray, T. (2012). İzmir Körfezi’nde (Ege Denizi) dağılım gösteren dinoflagellat türleri ve tür çeşitliliğinin mevsimsel değişimi. Review of Hydrobiology, 5(2), 71–84. ÇŞİDB, T.-M. (2021). Denizlerde Bütünleşik Kirlilik İzleme Programı, 2014-2019 Ege Denizi Özet Raporu.
Davidson, K., Gowen, R.J., Harrison, P.J., Fleming, L.E., Hoagland, P., & Moschonas, G. (2014). Anthropogenic nutrients and harmful algae in coastal waters. Journal of Environmental Management, 146, 206–216. https://doi.org/10.1016/j.jenvman.2014.07.002
Demir, N. (2001). Çift kabuklu (Bivalvia) üretim alanlarında bir fitoplankton izleme çalışması. Tarım Bilimleri Dergisi, 7, 56–62.
Demir, N., & Atay, D. (2000). Bodrum'da kafeslerde balık yetiştiriciliğinin fitoplanktona etkisi. Tarım Bilimleri Dergisi, 6(2), 8–11. https://doi.org/10.1501/Tarimbil_0000000942
Demir Yılmaz, I., Novosel, N., Levak Zorinc, M., Mišić Radić, T., Ftouhi, M.S., Guiraud, P., Ivošević DeNardis, N., & Formosa-Dague, C. (2023). Investigation of the role of cell hydrophobicity and EPS production in the aggregation of the marine diatom Cylindrotheca closterium under hypo-saline conditions. Marine Environmental Research, 188, 106020. https://doi.org/10.1016/j.marenvres.2023.106020
Dhar, B.C., Cimarelli, L., Singh, K.S., Brandi, L., Brandi, A., Puccinelli, C., Marcheggiani, S., & Spurio, R. (2015). Molecular detection of a potentially toxic diatom species. International Journal of Environmental Research and Public Health, 12(5), 4921 4941. https://doi.org/10.3390/ijerph120504921
Doğan, O., Örün, A., Bilgin, R., & İşinibilir, M. (2024a). Using the metabarcoding approach for characterization of community diversity in mucilage in the Sea of Marmara. In M. İşinibilir, A.E. Kıdeyş, & A. Malej (Eds.), Ecological Changes in the Sea of Marmara (pp. 635–663). https://doi.org/10.26650/B/LSB21LSB37.2024.023.018
Doğan, O., Örün, A.D., Bilgin, R., & İşinibilir, M. (2024b). Revealing mucilage event-linked community composition in the Sea of Marmara from eDNA metabarcoding data. Aquatic Sciences and Engineering, 39(2), 106–120. https://doi.org/10.26650/ASE20241434217
Dursun, F. (2021a). Occurence and variability of domoic acid in mussel (Mytilus galloprovincialis) samples from the Golden Horn Estuary, Sea of Marmara (Turkey). Bulletin of Environmental Contamination and Toxicology, 106(2), 318-326.
Dursun, F. (2021b). An assesment of domoic acid levels as a function of salinity-temperature variations in the Sea of Marmara. Ege Journal of Fisheries and Aquatic Sciences, 38(1), 87-93. https://doi.org/10.12714/egejfas.38.1.10
Dursun, F., Ünlü, S., & Yurdun, T. (2018). Determination of domoic acid in plankton net samples from Golden Horn Estuary, Turkey, using HPLC with fluorescence detection. Bulletin of Environmental Contamination and Toxicology, 100(3), 457–462. https://doi.org/10.1007/s00128-018-2275-y
Dursun, F., Ünlü, S., Tas, S., & Yurdun, T. (2017). Domoic acid variations in response to environmental conditions in an eutrophic estuary, Golden Horn (Turkey). Turkish Journal of Fisheries and Aquatic Sciences, 17, 653–662. https://doi.org/10.4194/1303-2712-v17_4_01
Dursun, F., Yurdun, T., & Ünlü, S. (2016). The first observation of domoic acid in plankton net samples from the Sea of Marmara, Turkey. Bulletin of Environmental Contamination and Toxicology, 96(1), 70–75. https://doi.org/10.1007/s00128-015-1704-4
Ehrenberg, C. G. (1832). Beiträge zur Kenntnis der Organisation der Infusorien und ihrer geographischen Verbreitung, besonders in Sibirien. Abh. Königl. Akad. Wiss. Berlin Phys. Kl., 1830, 1. Ehrenberg, C. G. (1839). Über fossile Infusorien in Südamerika. Bericht der Königlichen Akademie der Wissenschaften zu Berlin, 1839, 126–127.
Ehrenberg, C. G. (1841). Nachtrag zu dem Vortrage uÈber Verbreitung und Einfluss des mikroskipischen Lebens in SuÈ d-und Nordamerika. Berichte uÈ ber die zur Bekanntmachung geeigneten Verhandlung der KoÈniglich-Preussischen Akademie der Wissenschaften zu. Berlin, 201–209.
Ehrenberg, C. G. (1851). Über das mikroskopische Leben des Rio Conigo in Rio Janeiro Brasiliens. Bericht der Königlichen Akademie der Wissenschaften zu Berlin, 1841, 475–479. Ehrenberg, C. G. (1854). Mikrogeologie: Das Erden und Felsen schaffende Wirken des unsichtbar kleinen selbaständigen Lebens auf der Erde (Vol. 1). L. Voss.
Eker-Develi, E., Konucu, M., & Tekdal, D. (2020). Analysis of domoic acid within Nitzschia navis-varingia and other three Pseudo-nitzschia species isolated from the northeastern Mediterranean Sea. International Eurasian Conference on Biotechnology and Biochemistry, Turkey, 799-806.
Ergen, Z. (1967). Izmir Körfezi’nde tespit edilen başlıca planktonic organizmalar. Ege Üniversitesi Fen Fakültesi İlmi Raporlar Serisi, 47, 1–15.
Feist, B.E., & Levin, P.S. (2016). Novel indicators of anthropogenic influence on marine and coastal ecosystems. Frontiers in Marine Science, 3. https://doi.org/10.3389/fmars.2016.00113
Gaonkar, C.C., & Campbell, L. (2023). Metabarcoding reveals high genetic diversity of harmful algae in the coastal waters of Texas, Gulf of Mexico. Harmful Algae, 121, 102368. https://doi.org/10.1016/j.hal.2022.102368
Gaul, U., Geissler, U., Henderson, M., Mahoney, R., & Reimer, C.W. (1993). Bibliography on the Fine-Structure of Diatom Frustules (Bacillariophyceae). Proceedings of the Academy of Natural Sciences of Philadelphia, 144, 69–238.
Gençay, H.A., & Büyükışık, B. (2004). Effects of sewage outfall on phytoplankton community structure in Izmir Bay (Aegean Sea). Ege Journal of Fisheries and Aquatic Sciences, 21(1-2), 107–111.
Gençay, H.A., & Büyükışık , B. (2006). The studies on phytoplankton population dynamics at Dem Harbour (Çandarlı Bay, Aegean Sea). Ege Journal of Fisheries and Aquatic Sciences, 23(1), 43-53.
Gökalp, N. (1972). Edremit, Bodrum ve İskenderun körfezlerinin plankton durumunun karşılaştırmalı incelemesi. İstanbul Üniversitesi Fen Fakültesi Hidrobiyoloji Araştırma Enstitüsü Yayınları, 3, 1–71.
Gökpınar, Ş., & Koray, T. (1983). İzmir Körfezi planktonunda rastlanan Rhizosolenia (Ehrenberg) Brightwell genusu üzerine gözlemler, Ege University Faculty of Science Journal Series B, Supplement, 1, 201–219.
Grossi, F., Lagasio, M., Napoli, A., Provenzale, A., & Tepsich, P. (2024). Phytoplankton spring bloom in the NW Mediterranean Sea under climate change. Science of the Total Environment, 914, 169884. https://doi.org/10.1016/j.scitotenv.2024.169884
Guiry, M. D., Guiry, G.M. (2025). AlgaeBase. Retrieved 10 January 2025 from https://www.algaebase.org/about/
Güreşen, A., & Aktan Turan, Y. (2014). Seasonal and vertical variations of phytoplankton composition in marine park of Gökçeada Island in the North Aegean Sea. Journal of Black Sea/Mediterranean Environment, 20(3), 200–212.
Hallegraeff, G. M., Anderson, D. M., Belin, C., Bottein, M.-Y. D., Bresnan, E., Chinain, M., Enevoldsen, H., Iwataki, M., Karlson, B., McKenzie, C. H., Sunesen, I., Pitcher, G. C., Provoost, P., Richardson, A., Schweibold, L., Tester, P. A., Trainer, V. L., Yñiguez, A. T., & Zingone, A. (2021). Perceived global increase in algal blooms is attributable to intensified monitoring and emerging bloom impacts. Communications Earth & Environment, 2(1), 117. https://doi.org/10.1038/s43247-021-00178-8
Kaleli, A., Ozbayram, E.G., & Akcaalan, R. (2024). Environmental DNA metabarcoding reveals diverse phytoplankton assemblages and potentially harmful algal distribution along the urban coasts of Türkiye. Marine Environmental Research, 199, 106623. https://doi.org/10.1016/j.marenvres.2024.106623
Kaniou-Grigoriadou, I., Mouratidou, T., Katikou, P. (2005). Investigation on the presence of domoic acid in Greek shellfish. Harmful Algae, 4, 717-723. https://doi.org/10.1016/j.hal.2004.10.002 Karsten, G. (1899). Die diatomeen der kieler bucht. Wiss. Meeresunters. Keil NF, 4, 17–205.
Karsten, G. (1906). Das Phytoplankton des antarktischen Meeres nach dem Material der deutschen Tiefsee-Expedition, 1898-1899 (Vol. 2). G. Fischer.
Kooistra, W., Sarno, D., Balzano, S., Gu, H., Andersen, R., & Zingone, A. (2008). Global Diversity and Biogeography of Skeletonema Species (Bacillariophyta). Protist, 159, 177 193. https://doi.org/10.1016/j.protis.2007.09.004
Koray, T. (1987). One-celled microplankton species in Izmir Bay (Aegean Sea): A species list and a comparison with the records of adjacent regions. Doğa -Türk Biyolojisi Dergisi, 11(3), 130–146.
Koray, T. (1988). Symbiotic associations in microplankton of Izmir Bay (Aegean Sea) and their pollution dependent distributions. Doğa -Türk Biyolojisi Dergisi, 12(1), 46–52.
Koray, T. (1990). Factors effecting diatom abundance in a polluted area (Izmir Bay, Aegean Sea): A multiple regression model. Thalassographica, 13 (1), 19-23.
Koray, T. (1995). Phytoplankton species succession, diversity and nutrients in neritic waters of the Aegean Sea (Bay of Izmir). Oceanographic Literature Review, 5(19), 531–544.
Koray, T. (2004). Potentially toxic and harmful phytoplankton species along the coast of the Turkish Seas. Harmful algae, 2002, 335–337.
Koray, T., Benli, H., & Sever, T. (1994). Gökova Körfezi(Ege Denizi)’nin fitoplankton ve protozooplankton türleri üzerine bir araştırma. Ege Journal of Fisheries and Aquatic Sciences, 11, 42–43.
Koray, T., Büyükışık, B., Parlak, H., & Gökpınar, Ş. (1992). Unicellular organisms effecting sea water quality in the bay of Izmir: red-tides and other bloomings. Doğa Dergisi, 1(6), 135–157.
Koray, T., Gokpinar, S., Polat, S., Turkoglu, M., Yurga, L., Colak, F., Benli, H., & Sarihan, E. (2000). Comparison of the Qualitative characteristics of microplankton (Protista) of Turkish Seas (Black Sea, Aegean Sea, Northeastern Mediterranean). Ege Journal of Fisheries and Aquatic Sciences, 17(3-4), 231–247.
Koray, T., Gökpınar, Ş., & Yurga, L. (1999). The effects of the pollution on the distribution of microplankton in the bay of Izmir (Aegean Sea). Ege Journal of Fisheries and Aquatic Sciences, 16(3-4), 421–431.
Koray, T., & Kesici, U. (1994). Phytoplankton and protozooplankton species composition of the bay of Bodrum (Aegean Sea). Ege University Faculty of Science Journal, Series B, Supplement, 16(1), 971–980.
Kükrer, S., & Aydın, H. (2006). Karşıyaka Yat Limanı (İzmir İç Körfezi) Fitoplankton'unda Görülen Zamana Bağlı Değişimlerin Araştırılması. Ege Journal of Fisheries and Aquatic Sciences, 23, 139–144. Lebour, M. V. (1930). The Planktonic Diatoms of Northern Seas. Ray, Society, London.
Lemenkova, P. (2016, 2016–10–04). Chemical pollution of coastal waters in the Izmir Bay, Aegean Sea. International Scientific Conference in honor of O.G. Kusakin: “Biodiversity and Evolution”, Vladivostok, Russia, 121–126. https://hal.science/hal-01986700
Litchman, E. (2007). Resource competition and the ecological success of phytoplankton. In P.G. Falkowski, A.H. Knoll (Eds.), Evolution of Primary Producers in the Sea. 16, 351-375. https://doi.org/10.1016/B978-012370518-1/50017-5
Litchman, E., de Tezanos Pinto, P., Edwards, K., Klausmeier, C., Kremer, C., & Thomas, M. (2015). Global biogeochemical impacts of phytoplankton: A trait-based perspective. Journal of Ecology, 103(6), 1384–1396. https://doi.org/10.1111/1365-2745.12438
Lök, A., Metin, G., Acarli, S., Philippe, G. (2010). Harmful algal blooms (HABs) and black mussel Mytilus galloprovincialis (Linnaeus, 1758) culture in Izmir Bay (Iskele-Urla)-Turkey: Preliminary results on the annual feeding cycle using a qualitative approach. Turkish Journal of Fisheries and Aquatic Sciences, 10, 527-536. https://doi.org/10.4194/trjfas.2010.0413
Lundholm, N.C., C.; Escalera, L.; Fraga, S.; Hoppenrath, M.; Iwataki, M.; Larsen, J.; Mertens, K.; Moestrup, Ø.; Tillmann, U.; Zingone, A. (2009). IOC-UNESCO Taxonomic Reference List of Harmful Micro Algae. https://www.marinespecies.org/hab
Malviya, S., Scalco, E., Audic, S., Vincent, F., Veluchamy, A., Poulain, J., Wincker, P., Iudicone, D., de Vargas, C., Bittner, L., Zingone, A., & Bowler, C. (2016). Insights into global diatom distribution and diversity in the world's ocean. Proceedings of the National Academy of Sciences of the United States of America, 113(11), E1516–1525. https://doi.org/10.1073/pnas.1509523113
Mann, D. (2010). Discovering diatom species: Is a long history of disagreements about species-level taxonomy now at an end? Plant Ecology and Evolution, 143, 251–264. https://doi.org/10.5091/plecevo.2010.405
Martin, J. L., Santi, I., Pitta, P., John, U., & Gypens, N. (2022). Towards quantitative metabarcoding of eukaryotic plankton: an approach to improve 18S rRNA gene copy number bias. Metabarcoding and Metagenomics, 6. https://doi.org/10.3897/mbmg.6.85794
Mattei, F., & Scardi, M. (2021). Collection and analysis of a global marine phytoplankton primary-production dataset. Earth System Science Data, 13(10), 4967–4985. https://doi.org/10.5194/essd-13-4967-2021
Medlin, L., Elwood, H.J., Stickel, S., & Sogin, M.L. (1988). The characterization of enzymatically amplified eukaryotic 16S-like rRNA-coding regions. Gene, 71(2), 491–499. https://doi.org/10.1016/0378-1119(88)90066-2
Medlin, L., Elwood, H., Stickel, S., & Sogin, M.L. (2004). Morphological and genetic variation within the diatom Skeletonema costatum (Bacillariophyta): Evidence for a new species, Skeletonema pseudocostatum. Journal of Phycology, 27(4), 514–524. https://doi.org/10.1111/j.0022-3646.1991.00514.x
Medlin, L. K., Kooistra, W. H., Gersonde, R., & Wellbrock, U. (1996). Evolution of the diatoms (Bacillariophyta). II. Nuclear-encoded small-subunit rRNA sequence comparisons confirm a paraphyletic origin for the centric diatoms. Molecular Biology and Evolution, 13(1), 67–75. https://doi.org/10.1093/oxfordjournals.molbev.a025571
Metin, G., & Cirik, Ş. (1999). İzmir körfezi fitoplankton'undaki kantitatif değişimler. Ege Journal of Fisheries and Aquatic Sciences, 16(3-4), 363–374.
Najdek, M., Blažina, M., Djakovac, T., & Kraus, R. (2005). The role of the diatom Cylindrotheca closterium in a mucilage event in the northern Adriatic Sea: coupling with high salinity water intrusions. Journal of Plankton Research, 27(9), 851–862. https://doi.org/10.1093/plankt/fbi057
Nümann, W. (1955). İzmir Körfezi’nde 'balık kırılması' hadisesi. Hidrobiyoloji Mecmuası, 3A(2), 90–93.
Peragallo, H., Peragallo, M. (1897–1908). Diatomees marines de France et des district maritimes voisins. M.J. Tempere, Grez- sur-Loing. https://doi.org/10.5962/bhl.title.13501
Piredda, R., Claverie, J.-M., Decelle, J., de Vargas, C., Dunthorn, M., Edvardsen, B., Eikrem, W., Forster, D., Kooistra, W. H. C. F., Logares, R., Massana, R., Montresor, M., Not, F., Ogata, H., Pawlowski, J., Romac, S., Sarno, D., Stoeck, T., & Zingone, A. (2018). Diatom diversity through HTS-metabarcoding in coastal European seas. Scientific Reports, 8, 18059. https://doi.org/10.1038/s41598-018-36345-9 Raven, J.A. (1983). The transport and function of silicon in plants. Biological Reviews, 58(2), 179–207.
Round, F.E., Crawford, R.M., & Mann, D.G. (1990). Diatoms: Biology And Morphology of The Genera. Cambridge University Press.
Sabancı, F.Ç., & Koray, T. (2007). Atıksu arıtma tesisinin diyatom (Bacillariophyceae) tür komposizyonuna etkileri. Ege Journal of Fisheries and Aquatic Sciences, 24(1-2), 11–18.
Sabancı, F.Ç., & Koray, T. (2005). İzmir Körfezi'nde 1998-2001 yılları arasında fitoplanktonik tür çeşitliliği değişimi. Ege Journal of Fisheries and Aquatic Sciences, 22(3-4), 273–280.
Sabancı, F.Ç., & Koray, T. (2011a). Annual variation in the diversity, species richness and composition of the phytoplankton assemblages in the Izmir Bay (Eastern Aegean). Turkish Journal of Fisheries and Aquatic Sciences, 11, 303–313. https://doi.org/10.4194/trjfas.2011.215
Sabancı, F.Ç., & Koray, T. (2011b). The seasonal changes of diatom species composition and species diversity in Izmir Bay between 2008. Ege Journal of Fisheries and Aquatic Sciences, 28(2), 53–58.
Schmidt, A., Schmidt, M.V., Fricke, F.V., Heiden, H., Muller, O. & Hustedt, F.(1874–1959). Atlas der diatomaceenkunde. Heft 1-120, Tafeln 1-460. Reisland, Leipzig.
Smith, W., & West, T. (1853). A synopsis of the British Diatomaceæ : with remarks on their structure, functions and distribution; and instructions for collecting and preserving specimens (Vol. v.1). Printed for Smith and Beck, Pub. by J. Van Voorst.
Smucker, N. J., Pilgrim, E. M., Nietch, C. T., Gains-Germain, L., Carpenter, C., Darling, J. A., Yuan, L. L., Mitchell, R. M., & Pollard, A. I. (2024). Using DNA metabarcoding to characterize national scale diatom-environment relationships and to develop indicators in streams and rivers of the United States. Science of The Total Environment, 939, 173502. https://doi.org/10.1016/j.scitotenv.2024.173502
Sournia, A. (1986). Atlas Du Phytoplankton Marine, Volume I. Introduction, Cyanophycées, Dictyochophycées, Dinophycées et Raphidophycées. Muséum National dHistorie-Naturelle et Centre National de la Recherche Scientifique. Éditions Du Centre National de La Recherche Scientifique, 15.
Soyer, J. (1970). Bionomie benthique du plateau continental de la côte catalane française. III. Les peuplements de Copépodes Harpacticoides. Vie et Milieu, 21, 337–511.
Sökmen Yılmaz, E., & Yılmaz, S. (2019). A review on urbanization, pollution and biodiversity in İzmir. Uluslararası Çevresel Eğilimler Dergisi, 3(1), 31–38.
Stuart, J., Ryan, K.G., Pearman, J.K., Thomson-Laing, J., Hampton, H. G., Smith, K. F. (2024). A comparison of two gene regions for assessing community composition of eukaryotic marine microalgae from coastal ecosystems. Scientific Reports, 14, 6442. https://doi.org/10.1038/s41598-024-56993-4
Şahin, F. (2024). Phytoplankton species composition in the Turkish Coast of the Aegean Sea between 2014 and 2016. Marine Science and Technology Bulletin, 13(1), 24 31. https://doi.org/10.33714/masteb.1430701
Tas, S., Dursun, F., Aksu, A., & Balkis, N. (2016). Presence of the diatom genus Pseudo-nitzschia and particulate domoic acid in the Golden Horn Estuary (Sea of Marmara, Turkey). Diatom Research, 31(4), 339–349. https://doi.org/10.1080/0269249X.2016.1247020
Taş, S. (2014). Phytoplankton composition and abundance in the coastal waters of the Datça and Bozburun Peninsulas, south-eastern Aegean Sea (Turkey). Mediterranean Marine Science, 15(1), 84–94. https://doi.org/10.12681/mms.418
Tekdal, D., Demet, A., Eker-Develi, E., & Yıldız, H. (2024). Diatoms isolated from the marine mucilage in the Sea of Marmara in 2021. Journal of the Black Sea/Mediterranean Environment, 30(2), 71–96.
Theriot, E., Cannone, J., Gutell, R., & Alverson, A. (2009). The limits of nuclear encoded SSU rDNA for resolving the diatom Phylogeny. European Journal of Phycology, 44(3), 277 290. https://doi.org/10.1080/09670260902749159
Tomas C.R. (Ed.) (1997). Identifying marine phytoplankton. Academic Press, USA.
Tréguer, P.J., & De La Rocha, C.L. (2013). The world ocean silica cycle. Annual Review of Marine Science, 5, 477–501. https://doi.org/10.1146/annurev-marine-121211-172346
Wang, Z., Liu, L., Tang, Y., Li, A., Liu, C., Xie, C., Xiao, L., & Lu, S. (2022). Phytoplankton community and HAB species in the South China Sea detected by morphological and metabarcoding approaches. Harmful Algae, 118, 102297. https://doi.org/10.1016/j.hal.2022.102297
Witkowski, A., Lange-Bertalot, H., Metzeltin, D. (2000). Diatom Flora of Marine Coasts I. Iconographia Diatomologica 7. ARG Gantner Verlag KG, Ruggell, 7, 950.
Yucel Gier, G., Uslu, O., & Bizsel, N. (2008). Effects of fish farming on nutrient composition and plankton communities in the Eastern Aegean Sea (Turkey). Aquaculture Research, 39(2), 181 194. https://doi.org/10.1111/j.1365-2109.2007.01878.x
Yurga, L. (2015). Distribution of phytoplankton species in İzmir Bay for 15 years and its comparative statistical analysis. Ege Journal of Fisheries and Aquatic Science, 32(1), 25 30. https://doi.org/10.12714/egejfas.2015.32.1.04
Yurga, L. (2022). Investigation of harmful algae in İzmir Bay for the 30 years. Ege Journal of Fisheries and Aquatic Sciences, 39(1), 61–70. https://doi.org/10.12714/egejfas.39.1.09
Yurga, L., Koray, T., Başaran-Kaymakçı, A., & Egemen, Ö. (2005). The variations in microplanktonic species diversity and TRIX indexes in a sea cage fish farming locality. Ege Journal of Fisheries and Aquatic Sciences, 22(1-2), 177–186.
Zimmermann, J., Glöckner, G., Jahn, R., Enke, N., & Gemeinholzer, B. (2014). Metabarcoding vs. morphological identification to assess diatom diversity in environmental studies. Molecular Ecology Resources, 15(3), 526–542. https://doi.org/10.1111/1755-0998.12336
Zingone, A., Escalera, L., Aligizaki, K., Fernández-Tejedor, M., Ismael, A., Montresor, M., Mozetič, P., Taş, S., & Totti, C. (2021). Toxic marine microalgae and noxious blooms in the Mediterranean Sea: A contribution to the Global HAB Status Report. Harmful algae, 102, 101843. https://doi.org/10.1016/j.hal.2020.101843

Ayrıntılar

Birincil Dil

İngilizce

Konular

Hidrobiyoloji

Bölüm

Araştırma Makalesi

Yazarlar

Edanur Erbaş ^*
0009-0001-5512-8904
Türkiye

Fatma Çolak Sabancı
0000-0001-9122-594X
Türkiye

Erken Görünüm Tarihi

1 Eylül 2025

Yayımlanma Tarihi

10 Eylül 2025

Gönderilme Tarihi

17 Mart 2025

Kabul Tarihi

22 Haziran 2025

Yayımlandığı Sayı

Yıl 2025 Cilt: 42 Sayı: 3

DOI

https://doi.org/10.12714/egejfas.42.3.02

IZ

https://izlik.org/JA28PA38SP

Kaynak Göster

RIS / Bibtex

APA

Erbaş, E., & Çolak Sabancı, F. (2025). Checklist of marine pelagic diatoms from the Turkish side of the Aegean Sea. Ege Journal of Fisheries and Aquatic Sciences, 42(3), 201-212. https://doi.org/10.12714/egejfas.42.3.02