Araştırma Makalesi
BibTex RIS Kaynak Göster

Molecular and taxonomic studies on some Acarospora (Acarosporales, Ascomycota) species in Türkiye

Yıl 2023, Cilt: 16 Sayı: 2, 84 - 97, 15.08.2023

Dr. Mithat Güllü Mehmet Gökhan Halıcı Fatma Öztürk Küp

https://doi.org/10.46309/biodicon.2023.1197860

Öz

Acarospora is a crustose lichen genus in the family Acarosporaceae and has a wide distribution. While the lichen genus Acarospora has more than 200 species in the world, the number of species so far determined in Türkiye is 41. Here we report three Acarospora species: A. irregularis H. Magn., A. rosulata (Th. Fr.) H. Magn., A. thamnina (Tuck.) Herre and two lichenicolous fungal species: Lichenostigma svandae Vondrák & Šoun, Stigmidium fuscatae (Arnold) R. Sant. new to Türkiye. Detailed information on these 5 taxa is provided along with photographs. The nrITS, β tubulin and mtSSU gene regions of the new Acarospora records are studied and their phylogenetical positions are discussed.

Anahtar Kelimeler

Türkiye biodiversity lichenized fungi ITS gene region Acarospora.

Destekleyen Kurum

Erciyes Üniversity

Proje Numarası

FDK-2015-5927

Teşekkür

This study was supported by the Fund of Erciyes University Scientific research Project (Project no: FDK-2015-5927).

Kaynakça

  • [1] Temina, M. & Nevo, E. (2009). Lichens of Israel: diversity, ecology, and distribution. BioRisk, 3, 127-136.
  • [2] John, V., Türk, A. (2017). Türkiye likenleri listesi. Nezahat Gökyiğit Botanik Bahçesi Yayını.
  • [3] Halıcı, M.G., Hawksworth, D. & Aksoy, A. (2007). Contributions to the lichenized and lichenicolous fungal biota of Turkey. Mycotaxon, 102.
  • [4] Türk, A., Halıcı, M. G., Candan, M., Yavuz, Y. (2015). The lichenized fungus genus Peltigera in Turkey. Biological Diversity and Conservation 8(2), 146-156.
  • [5] Aras, S. & Duman, D.C. (2006). Isolation of DNA for sequence analysis from herbarium material of some lichen specimens. Turkish Journal of Botany, 30(6), 449-453.
  • [6] Halıcı, M.G., Vondrák, J., Demirel, R., Ceylan, A. & Candan, M. (2014). Teloschistaceae (lichenized ascomycetes) in Turkey II.-Some poorly known taxa. Supported by molecular data. Nova Hedwigia, 98.
  • [7] Barak, M.Ü., Halıcı, M.G. & Güllü, M. (2016). Identification of some lichenized fungi species of Erciyes Mountain Kayseri/Turkey by using ITS rDNA marker. Biyolojik Çeşitlilik ve Koruma, 9(2), 84-95.
  • [8] Vondrak, J., Halıcı, M. G., Güllü, M. & Demirel, R. (2016). Taxonomy of the genus Athallia and its diversity in Turkey. Turkish Journal of Botany, 40(3), 319-328.
  • [9] White, T., Bruns, T., Lee, S. & Taylor, J. (1990). Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. PCR protocols: a guide to methods and applications, 18(1), 315-322.
  • [10] Gardes, M. & Bruns, T. D. (1993). ITS primers with enhanced specificity for basidiomycetes‐application to the identification of mycorrhizae and rusts. Molecular ecology, 2(2), 113-118.
  • [11] Hall, TA. (1999). BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucl. Acids Symposium Series, 41: 95-98.
  • [12] Tamura, K., Stecher, G., Peterson, D., Filipski, A. & Kumar, S. (2013). MEGA6: molecular evolutionary genetics analysis version 6.0. Molecular biology and evolution, 30(12), 2725-2729.
  • [13] Knudsen, K., Kocourková, J. & Nordin, A. (2014). Conspicuous similarity hides diversity in the Acarospora badiofusca group (Acarosporaceae). The Bryologist, 117(4), 319-328.
  • [14] Brinker, S. R. & Knudsen, K. (2019). The first confirmed report of Acarospora bullata from North America. Opuscula Philolichenum, 18, 11-16.
  • [15] Westberg, M., Timdal, E., Asplund, J., Bendiksby, M., Haugan, R., Jonsson, F., … Millanes, A. (2015). New records of lichenized and lichenicolous fungi in Scandinavia. MycoKeys, 11, 33-61.
  • [16] Vondrak, J. & Jaroslav, Š.O.U.N. (2007). Lichenostigma svandae, a new lichenicolous fungus on Acarospora cervina. Lichenologist, 39(3), 211-216.
  • [17] Calatayud, V., Navarro-Rosinés, P. & Hafellner, J. (2002). A synopsis of Lichenostigma subgen. Lichenogramma (Arthoniales), with a key to the species. Mycological Research, 106(10), 1230-1242.
  • [18] Halıcı, M. G., Aksoy, A. (2009). Lichenised and Lichenicolous Fungi of Aladağlar National Park (Niğde, Kayseri and Adana Provinces) in Turkey. Turkish Journal of Botany. 33/3. 169-189.
  • [19] Triebel, D and Cáceres, M. (2004). Stigmidium. – In: Nash, T. H. III, Ryan, B. D., Diederich, P., Gries, C. & Bungartz, F. (eds). Lichen Flora of the Greater Sonoran Desert Region 2: 703–707. – Tempe, Arizona: Lichens Unlimited, Arizona State University.
  • [20] Hafellner, J., D. Triebel, B.D. Ryan and T.H. Nash III. (2002). On lichenicolous fungi from North America. II. Mycotaxon 84: 293–329.
  • [21] Kocourková, J. & Knudsen, K. (2018). Stigmidium rouxianum (Mycosphaerellaceae, Dothideomycetes), reported new for North America and California. Opuscula Philolichenum, 17, 293-298.

Türkiye'deki bazı Acarospora (Acarosporales, Ascomycota) türleri üzerinde moleküler ve taksonomik çalışmalar

Yıl 2023, Cilt: 16 Sayı: 2, 84 - 97, 15.08.2023

Dr. Mithat Güllü Mehmet Gökhan Halıcı Fatma Öztürk Küp

https://doi.org/10.46309/biodicon.2023.1197860

Öz

Acarospora, Acarosporaceae familyasında yer alan kabuksu bir liken cinsi olup, dünya üzerinde geniş bir yayılış alanına sahiptir. Acarospora cinsi içerisinde dünyada 200'den fazla tür bulunurken, Türkiye'de şu ana kadar tespit edilen tür sayısı 41'dir. Bu çalışma, Türkiye liken florası için üç likenleşmiş mantar ve iki likenikol mantar türü yeni kayıt olarak sunulmaktadır: Acarospora irregularis H. Magn., Acarospora rosulata (Th. Fr.) H. Magn., Acarospora thamnina (Tuck.) Herre, Lichenostigma svandae Vondrák & Šoun, Stigmidium fuscatae (Arnold) R. Sant. Bu 5 takson hakkında detaylı bilgiler fotoğraflarla birlikte verilmektedir. Yeni kayıtların nrITS, β tubulin ve mtSSU gen bölgeleri çalışılmış ve türlerin filogenetik konumu Acarospora cinsinde yer almış ve cinsin diğer türlerinden net olarak ayrılmıştır.

Anahtar Kelimeler

Türkiye biyoçeşitlilik likenleşmiş mantarlar ITS gen bölgesi Acarospora

Proje Numarası

FDK-2015-5927

Kaynakça

  • [1] Temina, M. & Nevo, E. (2009). Lichens of Israel: diversity, ecology, and distribution. BioRisk, 3, 127-136.
  • [2] John, V., Türk, A. (2017). Türkiye likenleri listesi. Nezahat Gökyiğit Botanik Bahçesi Yayını.
  • [3] Halıcı, M.G., Hawksworth, D. & Aksoy, A. (2007). Contributions to the lichenized and lichenicolous fungal biota of Turkey. Mycotaxon, 102.
  • [4] Türk, A., Halıcı, M. G., Candan, M., Yavuz, Y. (2015). The lichenized fungus genus Peltigera in Turkey. Biological Diversity and Conservation 8(2), 146-156.
  • [5] Aras, S. & Duman, D.C. (2006). Isolation of DNA for sequence analysis from herbarium material of some lichen specimens. Turkish Journal of Botany, 30(6), 449-453.
  • [6] Halıcı, M.G., Vondrák, J., Demirel, R., Ceylan, A. & Candan, M. (2014). Teloschistaceae (lichenized ascomycetes) in Turkey II.-Some poorly known taxa. Supported by molecular data. Nova Hedwigia, 98.
  • [7] Barak, M.Ü., Halıcı, M.G. & Güllü, M. (2016). Identification of some lichenized fungi species of Erciyes Mountain Kayseri/Turkey by using ITS rDNA marker. Biyolojik Çeşitlilik ve Koruma, 9(2), 84-95.
  • [8] Vondrak, J., Halıcı, M. G., Güllü, M. & Demirel, R. (2016). Taxonomy of the genus Athallia and its diversity in Turkey. Turkish Journal of Botany, 40(3), 319-328.
  • [9] White, T., Bruns, T., Lee, S. & Taylor, J. (1990). Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. PCR protocols: a guide to methods and applications, 18(1), 315-322.
  • [10] Gardes, M. & Bruns, T. D. (1993). ITS primers with enhanced specificity for basidiomycetes‐application to the identification of mycorrhizae and rusts. Molecular ecology, 2(2), 113-118.
  • [11] Hall, TA. (1999). BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucl. Acids Symposium Series, 41: 95-98.
  • [12] Tamura, K., Stecher, G., Peterson, D., Filipski, A. & Kumar, S. (2013). MEGA6: molecular evolutionary genetics analysis version 6.0. Molecular biology and evolution, 30(12), 2725-2729.
  • [13] Knudsen, K., Kocourková, J. & Nordin, A. (2014). Conspicuous similarity hides diversity in the Acarospora badiofusca group (Acarosporaceae). The Bryologist, 117(4), 319-328.
  • [14] Brinker, S. R. & Knudsen, K. (2019). The first confirmed report of Acarospora bullata from North America. Opuscula Philolichenum, 18, 11-16.
  • [15] Westberg, M., Timdal, E., Asplund, J., Bendiksby, M., Haugan, R., Jonsson, F., … Millanes, A. (2015). New records of lichenized and lichenicolous fungi in Scandinavia. MycoKeys, 11, 33-61.
  • [16] Vondrak, J. & Jaroslav, Š.O.U.N. (2007). Lichenostigma svandae, a new lichenicolous fungus on Acarospora cervina. Lichenologist, 39(3), 211-216.
  • [17] Calatayud, V., Navarro-Rosinés, P. & Hafellner, J. (2002). A synopsis of Lichenostigma subgen. Lichenogramma (Arthoniales), with a key to the species. Mycological Research, 106(10), 1230-1242.
  • [18] Halıcı, M. G., Aksoy, A. (2009). Lichenised and Lichenicolous Fungi of Aladağlar National Park (Niğde, Kayseri and Adana Provinces) in Turkey. Turkish Journal of Botany. 33/3. 169-189.
  • [19] Triebel, D and Cáceres, M. (2004). Stigmidium. – In: Nash, T. H. III, Ryan, B. D., Diederich, P., Gries, C. & Bungartz, F. (eds). Lichen Flora of the Greater Sonoran Desert Region 2: 703–707. – Tempe, Arizona: Lichens Unlimited, Arizona State University.
  • [20] Hafellner, J., D. Triebel, B.D. Ryan and T.H. Nash III. (2002). On lichenicolous fungi from North America. II. Mycotaxon 84: 293–329.
  • [21] Kocourková, J. & Knudsen, K. (2018). Stigmidium rouxianum (Mycosphaerellaceae, Dothideomycetes), reported new for North America and California. Opuscula Philolichenum, 17, 293-298.
Toplam 21 adet kaynakça vardır.

Ayrıntılar

Birincil Dil İngilizce
Konular Yapısal Biyoloji
Bölüm Araştırma Makaleleri
Yazarlar

Dr. Mithat Güllü 0000-0001-7100-9609

Mehmet Gökhan Halıcı 0000-0003-4797-1157

Fatma Öztürk Küp 0000-0002-4785-4017

Proje Numarası FDK-2015-5927
Erken Görünüm Tarihi 8 Ağustos 2023
Yayımlanma Tarihi 15 Ağustos 2023
Gönderilme Tarihi 1 Kasım 2022
Kabul Tarihi 28 Şubat 2023
Yayımlandığı Sayı Yıl 2023 Cilt: 16 Sayı: 2

Kaynak Göster

APA Güllü, D. M., Halıcı, M. G., & Öztürk Küp, F. (2023). Molecular and taxonomic studies on some Acarospora (Acarosporales, Ascomycota) species in Türkiye. Biological Diversity and Conservation, 16(2), 84-97. https://doi.org/10.46309/biodicon.2023.1197860
 Kapak Resmi İndir

18385183861838718388183892276122760