Contributions to the taxonomy and distribution of Tricholomella (Lyophyllaceae) based on the basidiomata collected from Halkalı, İstanbul
Abstract
Basidiomata of Tricholomella constricta (Fr.)
Zerova ex Kalamees belonging to Lyophyllaceae
are collected from Halkalı-İstanbul and studied using both morphologic and
molecular methods. According to the classical systematic the genus Tricholomella Zerova
ex Kalamees contains more than one species, such as T. constricta and T. leucocephala. Our studies found out that the two species are not
genetically too different, but conspecific and a new description is needed
including the members with- or without annulus. In this study, illustrations, a
short discussion and a simple phylogenetic tree are provided.
Keywords
Supporting Institution
Karadeniz Teknik Üniversitesi
Project Number
(BAP: FAT-2017-7044)
Thanks
This work was financially supported by the Karadeniz Technical University (BAP: FAT-2017-7044). Our sincere thanks to Dr. Marco Contu for his valuable comments.
References
- ReferencesAkata, I., Kabaktepe, Ş., Sevindik, M., Akgül, H. (2018). Macrofungi determined in Yuvacık basin (Kocaeli) and its close environs. Kastamonu University Journal of Forestry Faculty, 18 (2) 152-163.Akçay, M.E. (2019). A new edible macrofungus record for Turkey. Journal of Natural & Applied Sciences of East, 2 (1) 10-15.Altschul, S.F., Gish, W., Miller, W., Myers, E.W., Lipman, D.J. (1990). Basic local alignment search tool. Journal of Molecular Biology, (215) 403-410.Bellanger, J-M., Moreau, P-A., Corriol, G., Bidaud, A., Chalange, R., Dudova, Z., Richard, F. (2015). Plunging hands into the mushroom jar: a phylogenetic framework for Lyophyllaceae (Agaricales, Basidiomycota). Genetica, 143 (2) 169-194.Bon, M. (1999). Novitates - Tricholomatales (Marasmiaceae, Lyophyllaceae et Dermolomataceae). Documents Mycologiques, 29 (115) 33-34.Clémençon, H. (2009). Methods for Working with Macrofungi: Laboratory Cultivation and Preparation of Larger Fungi for Light Microscopy. Germany: Erchtesgadener Anzeiger.Consiglio, G., Orlandini, C., Setti, L., Moreno, G., Alvarado, P. (2011). Il genere Tricholomella in Italia. Rivista di Micologia, (2) 135-155.Doğan, H.H., Kurt, F. (2016). New macrofungi records from Turkey and macrofungal diversity of Pozantı-Adana. Turk J Bot, (40) 209-217.Gardes, M., Bruns, T.D. (1993). ITS primers with enhanced specificity for Basidiomycetes—application to the identification of mycorrhizae and rusts. Molecular Ecology, (2) 113-118.Hofstetter, V., Clémençon, H., Vilgalys, R., Moncalvo, J-M. (2002). Phylogenetic analyses of the Lyophylleae (Agaricales, Basidiomycota) based on nuclear and mitochondrial rDNA sequences. Mycological Research, 106 (9) 1043-1059.Kalamees, K. (2004). Palearctic Lyophyllaceae (Tricholomatales) in Northern and Eastern Europe and Asia. Scripta Mycologica, (18) 1-135.Keleş, A., Demirel, K., Uzun, Y., Kaya, A. (2014). Macrofungi of Ayder (Rize/Turkey) high plateau. Biological Diversity and Conservation, 7 (3) 177-183.Kirk, P.M., Cannon, P.F., Minter, D.W., Stalfers, J.A. (2008). Authors of Fungal Names. Wallingford, UK: CABI Bioscience. Knudsen, H., Vesterholt, J. (2008). Funga Nordica. Agaricoid, Boletoid and Cyphelloid Genera. Denmark: Nordsvamp.Mullis, K., Faloona, F.A. (1987). Specific synthesis of DNA in vitro via a polymerase-catalyzed chain reaction. Methods in Enzymology, (155) 335-350.Murray, M.G., Thompson, W.F. (1980). Rapid isolation of high molecular weight plant DNA. Nucleic Acids Research, 8 (19) 4321-4325.Ronquist, F., Huelsenbeck, J.P. (2003). MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics, (19) 1572-1574.Sesli, E., Denchev, C.M. (2014). Onward (Continuously Updated). Mycotaxon Webpage. Available online at http://www. mycotaxon.com/resources/weblists.html.Stamatakis, A. (2006). RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics, (22) 2688-2690.Tamura, K., Peterson, D., Peterson, N., Stecher, G., Nei, M., Kumar, S. (2011). MEGA5: Molecular volutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Molecular Biology and Evolution, 28 (10) 2731-2739.White, T.J., Bruns, T.D., Lee, S., Taylor, J.W. (1990). Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. M.A. Innis, D.H. Gelfand, J. Sninsky, T.J. White (Ed.) PCR protocols: a guide to methods and applications. Academic, (482 pp). San Diego.
İstanbul, Halkalı’dan toplanan bazidiyomalara göre Tricholomella constricta (Lyophyllaceae)’nın taksonomi ve yayılışına katkılar
Abstract
Lyophyllaceae ailesine ait Tricholomella constricta (Fr.) Zerova ex
Kalamees’in İstanbul-Halkalı’dan toplanan bazidiyomaları hem morfolojik ve hem
de moleküler yöntemlerle çalışılmıştır. Klasik sistematiğe göre Tricholomella
Zerova ex Kalamees
genusu, T. constricta ve T. leucocephala gibi birden fazla tür
içermektedir. Çalışmalarımız, bu iki türün genetik olarak birbirinden çok da
farklı olmadığını, aynı tür içerisinde olduğunu ve annulus içeren ve de
içermeyen türleri içerisine alan yeni bir deskripsiyon yapılması gerektiğini
ortaya çıkarmıştır. Bu çalışmada arazi ve laboratuvar resimleri, kısa bir
tartışma ve basit bir soyağacı verilmiştir.
Keywords
Project Number
(BAP: FAT-2017-7044)
References
- ReferencesAkata, I., Kabaktepe, Ş., Sevindik, M., Akgül, H. (2018). Macrofungi determined in Yuvacık basin (Kocaeli) and its close environs. Kastamonu University Journal of Forestry Faculty, 18 (2) 152-163.Akçay, M.E. (2019). A new edible macrofungus record for Turkey. Journal of Natural & Applied Sciences of East, 2 (1) 10-15.Altschul, S.F., Gish, W., Miller, W., Myers, E.W., Lipman, D.J. (1990). Basic local alignment search tool. Journal of Molecular Biology, (215) 403-410.Bellanger, J-M., Moreau, P-A., Corriol, G., Bidaud, A., Chalange, R., Dudova, Z., Richard, F. (2015). Plunging hands into the mushroom jar: a phylogenetic framework for Lyophyllaceae (Agaricales, Basidiomycota). Genetica, 143 (2) 169-194.Bon, M. (1999). Novitates - Tricholomatales (Marasmiaceae, Lyophyllaceae et Dermolomataceae). Documents Mycologiques, 29 (115) 33-34.Clémençon, H. (2009). Methods for Working with Macrofungi: Laboratory Cultivation and Preparation of Larger Fungi for Light Microscopy. Germany: Erchtesgadener Anzeiger.Consiglio, G., Orlandini, C., Setti, L., Moreno, G., Alvarado, P. (2011). Il genere Tricholomella in Italia. Rivista di Micologia, (2) 135-155.Doğan, H.H., Kurt, F. (2016). New macrofungi records from Turkey and macrofungal diversity of Pozantı-Adana. Turk J Bot, (40) 209-217.Gardes, M., Bruns, T.D. (1993). ITS primers with enhanced specificity for Basidiomycetes—application to the identification of mycorrhizae and rusts. Molecular Ecology, (2) 113-118.Hofstetter, V., Clémençon, H., Vilgalys, R., Moncalvo, J-M. (2002). Phylogenetic analyses of the Lyophylleae (Agaricales, Basidiomycota) based on nuclear and mitochondrial rDNA sequences. Mycological Research, 106 (9) 1043-1059.Kalamees, K. (2004). Palearctic Lyophyllaceae (Tricholomatales) in Northern and Eastern Europe and Asia. Scripta Mycologica, (18) 1-135.Keleş, A., Demirel, K., Uzun, Y., Kaya, A. (2014). Macrofungi of Ayder (Rize/Turkey) high plateau. Biological Diversity and Conservation, 7 (3) 177-183.Kirk, P.M., Cannon, P.F., Minter, D.W., Stalfers, J.A. (2008). Authors of Fungal Names. Wallingford, UK: CABI Bioscience. Knudsen, H., Vesterholt, J. (2008). Funga Nordica. Agaricoid, Boletoid and Cyphelloid Genera. Denmark: Nordsvamp.Mullis, K., Faloona, F.A. (1987). Specific synthesis of DNA in vitro via a polymerase-catalyzed chain reaction. Methods in Enzymology, (155) 335-350.Murray, M.G., Thompson, W.F. (1980). Rapid isolation of high molecular weight plant DNA. Nucleic Acids Research, 8 (19) 4321-4325.Ronquist, F., Huelsenbeck, J.P. (2003). MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics, (19) 1572-1574.Sesli, E., Denchev, C.M. (2014). Onward (Continuously Updated). Mycotaxon Webpage. Available online at http://www. mycotaxon.com/resources/weblists.html.Stamatakis, A. (2006). RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics, (22) 2688-2690.Tamura, K., Peterson, D., Peterson, N., Stecher, G., Nei, M., Kumar, S. (2011). MEGA5: Molecular volutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Molecular Biology and Evolution, 28 (10) 2731-2739.White, T.J., Bruns, T.D., Lee, S., Taylor, J.W. (1990). Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. M.A. Innis, D.H. Gelfand, J. Sninsky, T.J. White (Ed.) PCR protocols: a guide to methods and applications. Academic, (482 pp). San Diego.
Details
| Primary Language | English |
|---|---|
| Journal Section | RESEARCH ARTICLE |
| Authors | |
| Project Number | (BAP: FAT-2017-7044) |
| Publication Date | October 30, 2019 |
| Published in Issue | Year 2019 Volume: 10 Issue: 2 |
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